dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001422_1|CGC32
Gene ID: MGYG000001422_01594
Location and strand information: 1831691 - 1834423 (-)
Family: 1.B.14.6.12
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001422_1|CGC32
Gene ID: MGYG000001422_01595
Location and strand information: 1834426 - 1835115 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001422_1|CGC32
Gene ID: MGYG000001422_01596
Location and strand information: 1835530 - 1837659 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001422_1|CGC32
Gene ID: MGYG000001422_01597
Location and strand information: 1837694 - 1840837 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001422_1|CGC32
Gene ID: MGYG000001422_01598
Location and strand information: 1841128 - 1842309 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001422_1|CGC32
Gene ID: MGYG000001422_01599
Location and strand information: 1842712 - 1846071 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001422_1|CGC32
Gene ID: MGYG000001422_01600
Location and strand information: 1846097 - 1848400 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001422_1|CGC32
Gene ID: MGYG000001422_01601
Location and strand information: 1848537 - 1849820 (+)
Family: null
Protein type: null
Protein description: Oligogalacturonate lyase

Gene clsuter ID: MGYG000001422_1|CGC32
Gene ID: MGYG000001422_01602
Location and strand information: 1849833 - 1851671 (+)
Family: PL11
Protein type: CAZyme
Protein description: Rhamnogalacturonan endolyase YesW
Protein isoelectric point: 5.0491
Protein molecular weight: 68564.24
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_1|CGC32
Gene ID: MGYG000001422_01603
Location and strand information: 1851706 - 1853550 (+)
Family: PL11|PL11_1|CBM2|CBM35
Protein type: CAZyme
Protein description: Rhamnogalacturonan endolyase YesW
Protein isoelectric point: 4.6305
Protein molecular weight: 67994.86
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_1|CGC32
Gene ID: MGYG000001422_01604
Location and strand information: 1853553 - 1856849 (+)
Family: PL26
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.5143
Protein molecular weight: 125519.99
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_1|CGC32
Gene ID: MGYG000001422_01605
Location and strand information: 1856941 - 1860147 (+)
Family: GH28|PL11_1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.379
Protein molecular weight: 119519.86
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001422_1|CGC32
Gene ID: MGYG000001422_01606
Location and strand information: 1860196 - 1861602 (+)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.7729
Protein molecular weight: 52986.56
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001422_01602	PL11_e1
MGYG000001422_01603	PL11_e0\|CBM35_e56\|CBM2_e72\|4.2.2.23	pectin
MGYG000001422_01604	PL26_e0
MGYG000001422_01605	GH28_e36\|3.2.1.67\|3.2.1.-	pectin
MGYG000001422_01606	GH105_e35\|3.2.1.172	pectin

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001422_01594	hypothetical protein	TC	1831691	1834423	-	1.B.14.6.12
MGYG000001422_01595	hypothetical protein	null	1834426	1835115	-	No domain
MGYG000001422_01596	hypothetical protein	null	1835530	1837659	-	SusD-like_3\| SusD_RagB
MGYG000001422_01597	TonB-dependent receptor SusC	TC	1837694	1840837	-	1.B.14.6.1
MGYG000001422_01598	hypothetical protein	null	1841128	1842309	+	Phage_int_SAM_5\| Phage_integrase
MGYG000001422_01599	hypothetical protein	TC	1842712	1846071	+	1.B.14.6.1
MGYG000001422_01600	hypothetical protein	null	1846097	1848400	+	SusD-like_3\| SusD_RagB
MGYG000001422_01601	Oligogalacturonate lyase	null	1848537	1849820	+	Pectate_lyase22
MGYG000001422_01602	Rhamnogalacturonan endolyase YesW	CAZyme	1849833	1851671	+	PL11
MGYG000001422_01603	Rhamnogalacturonan endolyase YesW	CAZyme	1851706	1853550	+	PL11\| PL11_1\| CBM2\| CBM35
MGYG000001422_01604	hypothetical protein	CAZyme	1853553	1856849	+	PL26
MGYG000001422_01605	hypothetical protein	CAZyme	1856941	1860147	+	GH28\| PL11_1
MGYG000001422_01606	hypothetical protein	CAZyme	1860196	1861602	+	GH105
Protein ID	Protein Name	Type	Start	End	Strand	Signature